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Sr Bioinformatics Software Engineer

Illumina is a global leader in genomics technology, working to expand access to genomic technology and enable life-changing discoveries in human health.
Backend
Senior Software Engineer
Hybrid
5,000+ Employees
5+ years of experience
Healthcare · Biotech

Description For Sr Bioinformatics Software Engineer

Illumina is at the forefront of genomic technology, working to make genomics accessible to billions worldwide. This senior-level position combines software engineering expertise with bioinformatics knowledge to develop and validate critical genomic analysis tools. As a Sr Bioinformatics Software Engineer, you'll lead testing efforts for data analysis software, working with cutting-edge genomic technologies that directly impact human health and scientific discovery.

The role offers a unique opportunity to work at the intersection of software engineering and life sciences, where your work directly contributes to advancing healthcare and scientific research. You'll be responsible for designing and implementing automated software verification frameworks, collaborating with cross-functional teams, and ensuring the quality of bioinformatics pipelines and workflows.

The ideal candidate brings a strong background in both software engineering and bioinformatics, with experience in cloud computing, workflow languages, and automated testing. You'll work in a hybrid environment in San Diego, collaborating with world-class scientists and engineers to solve complex challenges in genomic analysis.

Illumina offers a collaborative environment where your work directly impacts human health through early disease detection and new treatment options. The company is committed to diversity, equality, and inclusion, maintaining zero-net gap in pay regardless of gender, ethnicity, or race. You'll be part of a company that's not just advancing technology, but truly making a difference in healthcare and human understanding.

This role is perfect for someone who wants to combine technical expertise with meaningful impact, working on projects that transform how we understand and treat diseases. You'll have the opportunity to grow professionally while contributing to life-changing discoveries in genomics.

Last updated a day ago

Responsibilities For Sr Bioinformatics Software Engineer

  • Work independently in cross-functional teams to lead the testing effort for data analysis software
  • Partner with software, bioinformatics developers and domain experts in designing, performing, and improving verification tests
  • Design and Implement automated software verification framework and scripts
  • Prepare necessary test artifacts required for formal software / product release
  • Develop and execute automated and unit tests
  • Carefully analyze and report test results
  • Participate in Code and Design Reviews
  • Ensure Software Development Life Cycle procedures are followed
  • Collaborate with assay development team and ensure they well trained on using the informatics software application(s)
  • Collaborate with peers to identify opportunities for process improvement

Requirements For Sr Bioinformatics Software Engineer

Python
Linux
  • Bachelor's degree with 5 years experience or Master's with 3 years experience or PhD
  • 4+ years of experience in formal verification of software or system in a regulated environment
  • 6+ years of working experience with software or system verification & validation
  • Background in developing and maintaining Bioinformatics pipelines and workflow
  • Good knowledge of running Bioinformatics workflows in commercial cloud (AWS, Azure, GCP)
  • Skills with workflow languages like Nextflow, Snakemake, WDL
  • Ability to develop automated scripts using Python, BASH
  • Basic knowledge of Linux and CLI environment
  • Understanding of Oncology, Molecular Biology, Bioinformatics
  • Ability to manage and mentor small team
  • Proven ability to work with internal and external teams

Benefits For Sr Bioinformatics Software Engineer

Medical Insurance
Dental Insurance
Vision Insurance
  • Equal opportunity employer
  • Zero-net gap in pay regardless of gender, ethnicity, or race
  • Employee Resource Groups (ERG)
  • Career development opportunities

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